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Assessment of Mitophagy in iPS Cell-Derived Neurons

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Mitophagy

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1759))

Abstract

Aberrant mitochondrial function is associated with many neurological diseases. Mitophagy is a key mechanism for the elimination of damaged mitochondria and maintenance of mitochondrial homeostasis. Induced pluripotent stem (iPS) cell technologies developed over the last decade have allowed us to analyze functions of the human neuron. Here we describe an efficient induction method from human iPS cells to neurons, followed by an image-based mitophagy assay.

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References

  1. Arun S, Liu L, Donmez G (2016) Mitochondrial biology and neurological diseases. Curr Neuropharmacol 14(2):143–154

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Celsi F, Pizzo P, Brini M, Leo S, Fotino C, Pinton P, Rizzuto R (2009) Mitochondria, calcium and cell death: a deadly triad in neurodegeneration. Biochim Biophys Acta 1787(5):335–344. doi:10.1016/j.bbabio.2009.02.021

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  3. Palikaras K, Tavernarakis N (2012) Mitophagy in neurodegeneration and aging. Front Genet 3:297. doi:10.3389/fgene.2012.00297

    Article  PubMed  PubMed Central  Google Scholar 

  4. Pellegrino MW, Haynes CM (2015) Mitophagy and the mitochondrial unfolded protein response in neurodegeneration and bacterial infection. BMC Biol 13:22. doi:10.1186/s12915-015-0129-1

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  5. Hattori N, Saiki S, Imai Y (2014) Regulation by mitophagy. Int J Biochem Cell Biol 53:147–150. doi:10.1016/j.biocel.2014.05.012

    Article  PubMed  CAS  Google Scholar 

  6. Pickrell AM, Youle RJ (2015) The roles of PINK1, parkin, and mitochondrial fidelity in Parkinson’s disease. Neuron 85(2):257–273. doi:10.1016/j.neuron.2014.12.007

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  7. Beilina A, Cookson MR (2015) Genes associated with Parkinson’s disease: regulation of autophagy and beyond. J Neurochem. doi:10.1111/jnc.13266

    Article  PubMed  PubMed Central  Google Scholar 

  8. Celardo I, Martins LM, Gandhi S (2014) Unravelling mitochondrial pathways to Parkinson’s disease. Br J Pharmacol 171(8):1943–1957. doi:10.1111/bph.12433

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  9. Okano H, Yamanaka S (2014) iPS cell technologies: significance and applications to CNS regeneration and disease. Mol Brain 7:22. doi:10.1186/1756-6606-7-22

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  10. Imaizumi K, Sone T, Ibata K, Fujimori K, Yuzaki M, Akamatsu W, Okano H (2015) Controlling the regional identity of hPSC-derived neurons to uncover neuronal subtype specificity of neurological disease phenotypes. Stem Cell Reports 5(6):1010–1022. doi:10.1016/j.stemcr.2015.10.005

    Article  PubMed  PubMed Central  Google Scholar 

  11. Matsumoto T, Fujimori K, Andoh-Noda T, Ando T, Kuzumaki N, Toyoshima M, Tada H, Imaizumi K, Ishikawa M, Yamaguchi R, Isoda M, Zhou Z, Sato S, Kobayashi T, Ohtaka M, Nishimura K, Kurosawa H, Yoshikawa T, Takahashi T, Nakanishi M, Ohyama M, Hattori N, Akamatsu W, Okano H (2016) Functional neurons generated from T cell-derived induced pluripotent stem cells for neurological disease modeling. Stem Cell Reports 6(3):422–435. doi:10.1016/j.stemcr.2016.01.010

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  12. Seibler P, Graziotto J, Jeong H, Simunovic F, Klein C, Krainc D (2011) Mitochondrial Parkin recruitment is impaired in neurons derived from mutant PINK1 induced pluripotent stem cells. J Neurosci Off J Soc Neurosci 31(16):5970–5976. doi:10.1523/JNEUROSCI.4441-10.2011

    Article  CAS  Google Scholar 

  13. Imaizumi Y, Okada Y, Akamatsu W, Koike M, Kuzumaki N, Hayakawa H, Nihira T, Kobayashi T, Ohyama M, Sato S, Takanashi M, Funayama M, Hirayama A, Soga T, Hishiki T, Suematsu M, Yagi T, Ito D, Kosakai A, Hayashi K, Shouji M, Nakanishi A, Suzuki N, Mizuno Y, Mizushima N, Amagai M, Uchiyama Y, Mochizuki H, Hattori N, Okano H (2012) Mitochondrial dysfunction associated with increased oxidative stress and alpha-synuclein accumulation in PARK2 iPSC-derived neurons and postmortem brain tissue. Mol Brain 5:35. doi:10.1186/1756-6606-5-35

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  14. Ohnuki M, Takahashi K, Yamanaka S (2009) Generation and characterization of human induced pluripotent stem cells. Curr Protoc Stem Cell Biol Chapter 4:Unit 4A 2. doi:10.1002/9780470151808.sc04a02s9

    Article  PubMed  Google Scholar 

  15. Yoshii SR, Kishi C, Ishihara N, Mizushima N (2011) Parkin mediates proteasome-dependent protein degradation and rupture of the outer mitochondrial membrane. J Biol Chem 286(22):19630–19640. doi:10.1074/jbc.M110.209338

    Article  PubMed  PubMed Central  CAS  Google Scholar 

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Acknowledgments

This work was supported by JSPS KAKENHI Grant Number JP16K19524 to K.I.; the Project for the Realization of Regenerative Medicine and Support for Core Institutes for iPS Cell Research from the Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT) to H.O.; Research Center Network for Realization Research Centers/Projects of Regenerative Medicine (the Program for Intractable Disease Research utilizing disease-specific iPS Cells) from the Japan Science and Technology Agency (JST) and Japan Agency for Medical Research and Development (AMED) to H.O.; the New Energy and Industrial Technology Development Organization (NEDO) to H.O. and W.A.; the Japan Society for the Promotion of Science (JSPS) to W.A.; and a Grant-in-Aid for the Global COE Program from MEXT to Keio University. H.O. is a scientific consultant for SanBio, Co. Ltd., Eisai, Co., Ltd.

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Correspondence to Wado Akamatsu .

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Ishikawa, KI., Yamaguchi, A., Okano, H., Akamatsu, W. (2017). Assessment of Mitophagy in iPS Cell-Derived Neurons. In: Hattori, N., Saiki, S. (eds) Mitophagy. Methods in Molecular Biology, vol 1759. Humana Press, New York, NY. https://doi.org/10.1007/7651_2017_10

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  • DOI: https://doi.org/10.1007/7651_2017_10

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7749-9

  • Online ISBN: 978-1-4939-7750-5

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